Stem-loop sequence dps-let-7

Accession

MI0001288 (change log)

Description

Drosophila pseudoobscura let-7 stem-loop

Gene family

MIPF0000002; let-7

Literature search

2 open access papers mention dps-let-7
(3 sentences)

Stem-loop

     u      uu   g     g           guacu 
5' uc ggcaaa  gag uagua guuguauagua     u
   || ||||||  ||| ||||| |||||||||||     c
3' ag ucguuu  uuc aucgu uaacauaucau     a
     u      cu   g     g           gcuag 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (dpse_r2.26_FB2012_01): 4_group3: 3635655-3635731 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from dps-let-7

• dps-mir-100: 4_group3: 3634753-3634852 [+]
• dps-let-7: 4_group3: 3635655-3635731 [+]
• dps-mir-125: 4_group3: 3636011-3636120 [+]

Database links

• miRBase Tracker:MI0001288

Mature sequence dps-let-7

• Accession: MIMAT0001198
• Sequence: 11 - ugagguaguagguuguauagu - 31
• Evidence: by similarity; MI0000416, MI0000416