Stem-loop sequence dps-mir-2a-1

Accession

MI0001290 (change log)

Description

Drosophila pseudoobscura miR-2a-1 stem-loop

Gene family

MIPF0000049; mir-2

Literature search

1 open access papers mention dps-mir-2a-1
(8 sentences)

Stem-loop

             -     -         a    auuuug 
5' gcugggcuca caaag ugguuguga augc      c
   |||||||||| ||||| ||||||||| ||||       
3' cggcucgagu guuuc accgacacu uacg      u
             a     g         a    cccguu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (dpse_r2.26_FB2012_01): 4_group5: 1152501-1152574 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from dps-mir-2a-1

• dps-mir-2b-2: 4_group5: 1152201-1152283 [+]
• dps-mir-2a-1: 4_group5: 1152501-1152574 [+]
• dps-mir-2a-2: 4_group5: 1153087-1153158 [+]

Database links

• miRBase Tracker:MI0001290

Mature sequence dps-miR-2a

• Accession: MIMAT0001200
• Sequence: 47 - uaucacagccagcuuugaugagc - 69
• Evidence: by similarity; MI0000118, MI0000118