Stem-loop sequence dps-mir-124

Accession

MI0001323 (change log)

Description

Drosophila pseudoobscura miR-124 stem-loop

Gene family

MIPF0000021; mir-124

Literature search

1 open access papers mention dps-mir-124
(1 sentences)

Stem-loop

   -----uc    g  a      ucucc      c      ag    a    uau 
5'        guuu gu cguuuu     ugguau cacugu  gccu uaug   u
          |||| || ||||||     |||||| ||||||  |||| ||||   u
3'        caaa ca gcgaga     accgua guggcg  cgga auac   c
   aucaucu    g  g      -----      a      ca    -    cag 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (dpse_r2.26_FB2012_01): 4_group3: 10867628-10867725 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from dps-mir-124

• dps-mir-124: 4_group3: 10867628-10867725 [-]
• dps-mir-287: 4_group3: 10858875-10858954 [-]

Database links

• miRBase Tracker:MI0001323

Mature sequence dps-miR-124

• Accession: MIMAT0001229
• Sequence: 57 - uaaggcacgcggugaaugccaag - 79
• Evidence: by similarity; MI0000373, MI0000373