Stem-loop sequence dre-mir-187-1

AccessionMI0001370
Previous IDsdre-mir-187
DescriptionDanio rerio miR-187-1 stem-loop
Gene family MIPF0000078; mir-187
Stem-loop
   ugaccuguggcu gg   gg                  ----     c  u 
5'             g  cca  ggcugcaacacaggacau    gggag ug c
               |  |||  ||||||||||||||||||    ||||| || u
3'             c  ggu  ccgacguuguguucugug    cccuc ac c
   -----------g aa   ga                  cucg     -  u 
Get sequence
Deep sequencing
153 reads, 16.7 reads per million, 4 experiments
Confidence
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Zv9) Overlapping transcripts
19: 35551006-35551094 [+]
antisense
ENSDART00000079070 ; rp9-203; intron 1
Database links

Mature sequence dre-miR-187

Accession MIMAT0001274
Sequence

61 - 

ucgugucuuguguugcagcc

 - 80

Get sequence
Deep sequencing157 reads, 4 experiments
Evidence experimental; PCR [1], cloned [2]

References

1
PMID:12624257 "Vertebrate microRNA genes" Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP Science. 299:1540(2003).
2
PMID:15937218 "The developmental miRNA profiles of zebrafish as determined by small RNA cloning" Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T Genes Dev. 19:1288-1293(2005).