Accession
MI0001387
Description
Danio rerio
dre-mir-221 precursor miRNA mir-221
Gene
family?
family?
RF00651;
mir-221
Literature search
10 open access papers mention dre-mir-221
(74 sentences)
(74 sentences)
Sequence
34062
reads,
1678
reads per million, 11 experiments
gucgugaACCUGGCAUACAAUGUAGAUUUCUGUgugguacuaucuacAGCUACAUUGUCUGCUGGGUUUCaggccagcagaauaauucugcuc
(((..((((((((((.(((((((((....(((((.(((...))))))))))))))))).))))))))))..))).(((((((...))))))).
(((..((((((((((.(((((((((....(((((.(((...))))))))))))))))).))))))))))..))).(((((((...))))))).
Structure
------------------- gu U AUUU u a
guc gaACCUGGCA ACAAUGUAG CUGUg ggu
||| |||||||||| ||||||||| ||||| ||| c
cgg UUUGGGUCGU UGUUACAUC GAcau cua
cucgucuuaauaagacgac aC C ---- - u
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr9: 33920932-33921024 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dre-mir-221
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-221-3p
| Accession | MIMAT0001288 |
| Description | Danio rerio dre-miR-221-3p mature miRNA |
| Sequence | 48 - AGCUACAUUGUCUGCUGGGUUUC - 70 |
| Evidence |
experimental
cloned [1-2] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-221-5p
| Accession | MIMAT0031926 |
| Description | Danio rerio dre-miR-221-5p mature miRNA |
| Sequence | 8 - ACCUGGCAUACAAUGUAGAUUUCUGU - 33 |
| Evidence | not_experimental |
| Database links |
|
References
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