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miRBase |
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Stem-loop sequence zma-MIR172d |
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Accession | MI0001494 (change log) | ||||
Description | Zea mays miR172d stem-loop | ||||
Gene family | MIPF0000035; MIR172 | ||||
Literature search |
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36 open access papers mention zma-MIR172d | ||||
Stem-loop |
c a - -c - u g 5' gugcagca caucaagauuc cauc c ca gc c a |||||||| ||||||||||| |||| | || || | u 3' uacgucgu guaguucuaag guag g gu cg g c a a a ua a u u |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence zma-miR172d-5p |
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Accession | MIMAT0015156 |
Previous IDs | zma-miR172d* |
Sequence |
4 - cagcaccaucaagauucaca - 23 |
Deep sequencing | 7 reads, 2 experiments |
Evidence | experimental; Illumina [2] |
Mature sequence zma-miR172d-3p |
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Accession | MIMAT0001388 |
Previous IDs | zma-miR172d |
Sequence |
54 - agaaucuugaugaugcugca - 73 |
Deep sequencing | 2359 reads, 5 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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References |
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1 |
"Identifying microRNAs in plant genomes"
Proc IEEE CSB :718-723(2004).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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