miRBase entry: sbi-MIR393a

Stem-loop sbi-MIR393a


Accession
MI0001530
Description
Sorghum bicolor sbi-MIR393a precursor miRNA
Gene family
MIPF0000083; MIR393

Literature search
1 open access papers mention sbi-MIR393a
(1 sentences)

Sequence

acaaugccuggaggaagcaUCCAAAGGGAUCGCAUUGAUCcgucacuccuuccauucuaucauggguggucgucgucuacaaggacuucguucccgacggaucaugcgauccuuuuggaggcuuccucuagacauuacu
..((((.(((((((((((.((((((((((((((((.((((((((.......((((((......)))))).((..((((....))))..)).....)))))))))))))))))))))))).))))))))))).))))...

Structure
-ac    c           a                U        -------------------acuccuu      ua 
   aaug cuggaggaagc UCCAAAGGGAUCGCAU GAUCcguc                          ccauuc  u
   |||| ||||||||||| |||||||||||||||| ||||||||                          ||||||   
   uuac gaucuccuucg agguuuuccuagcgua cuaggcag                          gguggg  c
uca    a           g                -        cccuugcuucaggaacaucugcugcu      ua 


Annotation confidence Not enough data
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Genome context
chr3: 6442916-6443054 [+]

Database links

Mature sbi-miR393a

Accession MIMAT0001426
Description Sorghum bicolor sbi-miR393a mature miRNA
Sequence 20 - UCCAAAGGGAUCGCAUUGAUC - 40
Evidence not_experimental

References

  1. Conservation and divergence of microRNA families in plants
    "Dezulian T, Palatnik JF, Huson DH, Weigel D"
    Genome Biol. (2005) 6:P13