Stem-loop sbi-MIR396b

Accession

MI0001538

Description

Sorghum bicolor sbi-MIR396b precursor miRNA

Gene family

MIPF0000047; MIR396

Literature search

3 open access papers mention sbi-MIR396b
(13 sentences)

Sequence

agauggccuucuuugugaucUUCCACAGCUUUCUUGAACUGcaucucuaagaggagcagcuugaacucucuaccugcaugagcaggugcaguucaauaaagcugugggaaacugcagagagaggccaa
...((((((((((((((...((((((((((((.(((((((((..........((((.((......))))))((((((....))))))))))))))).))))))))))))...)))))))).)))))).

Structure

aga      -        auc            C         aucucuaagaggagcagcuugaacucucu      a 
   uggccu ucuuugug   UUCCACAGCUUU UUGAACUGc                             accugc u
   |||||| ||||||||   |||||||||||| |||||||||                             ||||||  
   accgga agagacgu   agggugucgaaa aacuugacg                             uggacg g
--a      g        caa            u         -----------------------------      a 

Annotation confidence Not enough data

Genome context

chr10: 4466694-4466821 [+]

Mature sbi-miR396b

• Accession: MIMAT0001434
• Description: Sorghum bicolor sbi-miR396b mature miRNA
• Sequence: 21 - UUCCACAGCUUUCUUGAACUG - 41
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13