Stem-loop sbi-MIR169c

Accession

MI0001557

Description

Sorghum bicolor sbi-MIR169c precursor miRNA

Gene family

MIPF0000012; MIR169_1

Literature search

4 open access papers mention sbi-MIR169c
(25 sentences)

Sequence

uggcgagagccugccuuuggUAGCCAAGGAUGACUUGCCUAcacggccuugcgaguuccgguugcauggccaguucaguuggguuugugggcggucaccuuggcuagccugaguggcucuugccug
.((((((((((...(((.(((((((((((.(((((.(((((((.((((.(((((.......))))).))))..............)))))))))))))))))))).))).))).))))))))))..

Structure

-u          ugc   u   -        A     U       -------------c    u     gu 
  ggcgagagcc   cuu ggU AGCCAAGG UGACU GCCUAca              ggcc ugcga  u
  ||||||||||   ||| ||| |||||||| ||||| |||||||              |||| |||||  c
  ccguucucgg   gag ccg ucgguucc acugg cgggugu              ccgg acguu  c
gu          --u   u   a        -     -       uuggguugacuuga    u     gg 

Annotation confidence Not enough data

Genome context

chr6: 39850630-39850755 [+]

Mature sbi-miR169c

• Accession: MIMAT0001453
• Description: Sorghum bicolor sbi-miR169c mature miRNA
• Sequence: 21 - UAGCCAAGGAUGACUUGCCUA - 41
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13