miRBase entry: ame-mir-12

Stem-loop ame-mir-12


Accession
MI0001576
Description
Apis mellifera ame-mir-12 precursor miRNA
Gene family
MIPF0000181; mir-12

Literature search
6 open access papers mention ame-mir-12
(8 sentences)

Sequence

aagacaugggugUGAGUAUUACAUCAGGUACUGGUgugauauucagacaaccaguacuuguguuauacuuacgcucaugucuu
(((((((((((((((((((.(((.(((((((((((((.........)).)))))))))))))).)))))))))))))))))))

Structure
                   U   U           -  gau 
aagacaugggugUGAGUAU ACA CAGGUACUGGU gu   a
||||||||||||||||||| ||| ||||||||||| ||   u
uucuguacucgcauucaua ugu guucaugacca ca   u
                   u   -           a  gac 


Annotation confidence Not enough data
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Genome context
CM000055.5: 3362974-3363056 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ame-mir-12
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ame-miR-12-5p

Accession MIMAT0001472
Description Apis mellifera ame-miR-12-5p mature miRNA
Sequence 13 - UGAGUAUUACAUCAGGUACUGGU - 35
Evidence experimental
RTPCR [1], Illumina [2]

References

  1. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670

  2. PubMed ID: 20491979
    Correlated expression patterns of microRNA genes with age-dependent behavioural changes in honeybee
    "Behura SK, Whitfield CW"
    "Insect Mol Biol (2010) 19:431-439