miRBase entry: ame-mir-219

Stem-loop ame-mir-219


Accession
MI0001582
Description
Apis mellifera ame-mir-219 precursor miRNA
Gene family
MIPF0000044; mir-219

Literature search
1 open access papers mention ame-mir-219
(1 sentences)

Sequence

aauugaaugucucaggcaaUGAUUGUCCAAACGCAAUUCUUGucuaaacgguacgaaaucaagaauuguguggggacaucagcgcucgaggugcgauucaac
..(((((((((((.(((..((((.((((..((((((((((((.................))))))))))))..))))))))..))).)))..)).)))))).

Structure
aa      -  --   a   aa    U    AA            ucuaaac 
  uugaau gu  cuc ggc  UGAU GUCC  ACGCAAUUCUUG       g
  |||||| ||  ||| |||  |||| ||||  ||||||||||||       g
  aacuua cg  gag ucg  acua cagg  uguguuaagaac       u
-c      g  ug   c   cg    -    gg            uaaagca 


Annotation confidence Not enough data
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Genome context
CM000057.5: 42977-43078 [-]

Database links

Mature ame-miR-219-5p

Accession MIMAT0001478
Description Apis mellifera ame-miR-219-5p mature miRNA
Sequence 20 - UGAUUGUCCAAACGCAAUUCUUG - 42
Evidence experimental
RTPCR [1], Illumina [2]

References

  1. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670

  2. PubMed ID: 20491979
    Correlated expression patterns of microRNA genes with age-dependent behavioural changes in honeybee
    "Behura SK, Whitfield CW"
    "Insect Mol Biol (2010) 19:431-439