miRBase entry: ame-mir-317

Stem-loop ame-mir-317


Accession
MI0001593
Description
Apis mellifera ame-mir-317 precursor miRNA
Gene family
MIPF0000144; mir-317

Literature search
4 open access papers mention ame-mir-317
(7 sentences)

Sequence

gcucucggagaacagggagccacucugcguucacucgguggguaaugaagcgggUGAACACAGCUGGUGGUAUCUCAGUuuucugagggc
(((((((((((((.(((((((((((((.(((((((((.(.........).))))))))).)))..)))))).)))).)))))))))))))

Structure
             a    -      --   c         g ggg 
gcucucggagaac ggga gccacu  cug guucacucg u   u
||||||||||||| |||| ||||||  ||| ||||||||| |   a
cgggagucuuuUG CUCU UGGUGG  GAC CAAGUgggc a   a
             A    A      UC   A         g agu 


Annotation confidence Not enough data
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Genome context
CM000058.5: 6935820-6935909 [+]

Database links

Mature ame-miR-317-3p

Accession MIMAT0001488
Description Apis mellifera ame-miR-317-3p mature miRNA
Sequence 55 - UGAACACAGCUGGUGGUAUCUCAGU - 79
Evidence experimental
array [1], Illumina [2]

References

  1. PubMed ID: 17543122
    Computational and transcriptional evidence for microRNAs in the honey bee genome
    Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
    Genome Biol (2007) 8:R97

  2. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670