miRBase entry: ame-mir-iab-4

Stem-loop ame-mir-iab-4


Accession
MI0001598
Description
Apis mellifera ame-mir-iab-4 precursor miRNA
Gene family
MIPF0000151; mir-iab-4


Sequence

gugaaacccccuguACGUAUACUGAAUGUAUCCUGAguguauuucuguccgguauaccuucaguauacguaacaggaggcuacac
(((...((.(((((((((((((((((.((((((.((..(.....)..)).)).)))).)))))))))))).))))).))...)))

Structure
   aaa  c     -            U    -  U  gu u 
gug   cc ccugu ACGUAUACUGAA GUAU CC GA  g a
|||   || ||||| |||||||||||| |||| || ||  | u
cac   gg ggaca ugcauaugacuu caua gg cu  c u
   auc  a     a            c    u  c  gu u 


Annotation confidence Not enough data
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Genome context
CM000069.5: 3257339-3257423 [+]

Database links

Mature ame-miR-iab-4-5p

Accession MIMAT0001493
Description Apis mellifera ame-miR-iab-4-5p mature miRNA
Sequence 15 - ACGUAUACUGAAUGUAUCCUGA - 36
Evidence experimental
RTPCR [1], Illumina [2-3]

References

  1. PubMed ID: 17543122
    Computational and transcriptional evidence for microRNAs in the honey bee genome
    Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
    Genome Biol (2007) 8:R97

  2. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670

  3. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226