Stem-loop sequence aga-mir-79

Accession

MI0001629 (change log)

Description

Anopheles gambiae miR-79 stem-loop

Gene family

MIPF0000014; mir-9

Literature search

1 open access papers mention aga-mir-79
(3 sentences)

Stem-loop

   gug   -u      cgc       cgc       g     --   aau 
5'    ccc  uuuguc   gcuuugg   uuuagcu uauga  uag   u
      |||  ||||||   |||||||   ||||||| |||||  |||    
3'    ggg  aagcag   cgaaacc   agaucga auacu  auc   u
   -ca   uu      aua       auu       a     uu   aag 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AgamP3; GCA_000005575.1): chr3R: 5888298-5888391 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from aga-mir-79

• aga-mir-9c: chr3R: 5891167-5891256 [-]
• aga-mir-306: chr3R: 5888600-5888675 [-]
• aga-mir-79: chr3R: 5888298-5888391 [-]
• aga-mir-9b: chr3R: 5887786-5887878 [-]

Database links

• miRBase Tracker:MI0001629

Mature sequence aga-miR-79

• Accession: MIMAT0001524
• Sequence: 59 - uaaagcuagauuaccaaagcau - 80
• Evidence: by similarity; MI0000374