![]() |
miRBase |
![]() |
![]() |
Stem-loop sequence mmu-mir-450a-1 |
||||||||||||||||
Accession | MI0001653 (change log) | |||||||||||||||
Previous IDs | mmu-mir-450;mmu-mir-450-1 | |||||||||||||||
Description | Mus musculus miR-450a-1 stem-loop | |||||||||||||||
Gene family | MIPF0000128; mir-450 | |||||||||||||||
Literature search |
![]()
7 open access papers mention mmu-mir-450a-1 | |||||||||||||||
Stem-loop |
--gaga u u u ugc 5' gauac gagcuguuu ugcga guguuccuaauaug u ||||| ||||||||| ||||| |||||||||||||| a 3' cugug uucgauaaa acguu uacaaggguuauau u acauaa u u u uaa |
|||||||||||||||
Deep sequencing |
| |||||||||||||||
Confidence |
Annotation confidence: high
| |||||||||||||||
Comments |
Xie et al. [1] refer to this sequence by the internal identifier MIR238. The sequence is unrelated to C. elegans mir-238 (MI0000313). |
|||||||||||||||
Genome context |
|
|||||||||||||||
Clustered miRNAs |
|
|||||||||||||||
Database links |
|
Mature sequence mmu-miR-450a-5p |
|
Accession | MIMAT0001546 |
Previous IDs | mmu-miR-450;mmu-miR-450a-5p;mmu-miR-450a |
Sequence |
18 - uuuugcgauguguuccuaauau - 39 |
Deep sequencing | 60635 reads, 102 experiments |
Evidence | experimental; cloned [2], Illumina [3-4] |
Database links |
|
Predicted targets |
|
Mature sequence mmu-miR-450a-1-3p |
|
Accession | MIMAT0017182 |
Previous IDs | mmu-miR-450a-1* |
Sequence |
53 - auugggaacauuuugcauaaau - 74 |
Deep sequencing | 6237 reads, 98 experiments |
Evidence | experimental; Illumina [4] |
Database links |
|
Predicted targets |
|
References |
|
1 |
PMID:15735639
"Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals"
Nature. 434:338-345(2005).
|
2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
|
3 |
PMID:20215419
"MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing"
Mol Hum Reprod. 16:463-471(2010).
|
4 |
PMID:20413612
"Mammalian microRNAs: experimental evaluation of novel and previously annotated genes"
Genes Dev. 24:992-1009(2010).
|