Stem-loop osa-MIR439g

Accession

MI0001697

Description

Oryza sativa osa-MIR439g precursor miRNA

Gene family

MIPF0000092; MIR439

Literature search

2 open access papers mention osa-MIR439g
(2 sentences)

Sequence

83 reads, 57 reads per million, 2 experiments

uccugucgaacugacgcaguucgacauguaccugucgaacugugguuguucgauagguaucccUGUCGAACCGCGGUUGUUCGAcagg
.((((((((((...(((.((((((((.(((((((((((((.......)))))))))))))...)))))))).)))...))))))))))

Structure

u          uga   a        --u             ug 
 ccugucgaac   cgc guucgaca   guaccugucgaac  u
 ||||||||||   ||| ||||||||   |||||||||||||  g
 ggacAGCUUG   GCG CAAGCUGU   uauggauagcuug  g
-          UUG   C        ccc             uu 

Annotation confidence Not enough data

Genome context

Chr8: 3664228-3664315 [+]

Mature osa-miR439g

• Accession: MIMAT0001595
• Description: Oryza sativa osa-miR439g mature miRNA
• Sequence: 64 - UGUCGAACCGCGGUUGUUCGA - 84
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15805478
   Cloning and characterization of microRNAs from rice
   "Sunkar R, Girke T, Jain PK, Zhu JK"
   "Plant Cell (2005) 17:1397-1411