Stem-loop sequence mtr-MIR171a

Accession

MI0001753 (change log)

Previous IDs

mtr-MIR171

Description

Medicago truncatula miR171 stem-loop

Gene family

MIPF0000030; MIR171_1

Literature search

8 open access papers mention mtr-MIR171a
(53 sentences)

Stem-loop

   ugaauuccccuc     --uu          u  u        a  c    uu  ug   
5'             cgcuu    ugauguuggc ug cucaauca au aaag  cu  aa 
               |||||    |||||||||| || |||||||| || ||||  ||  | a
3'             gcgaa    acuauaaccg gc gaguuagu ug uuuc  ga  uu 
   ---cugaaaaua     uuau          u  u        c  a    uu  gu   

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): contig_164461: 1012-1125 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0001753

Mature sequence mtr-miR171a

• Accession: MIMAT0001655
• Previous IDs: mtr-miR171
• Sequence: 75 - ugauugagucgugccaauauc - 95
• Evidence: by similarity; MI0001137

References

1. "Conservation and divergence of microRNA families in plants" Dezulian T, Palatnik JF, Huson DH, Weigel D http://genomebiology.com/2005/6/11/p13 (2005).