Stem-loop sof-MIR168b

Accession

MI0001764

Description

Saccharum officinarum sof-MIR168b precursor miRNA

Gene family

MIPF0000081; MIR168

Literature search

4 open access papers mention sof-MIR168b
(21 sentences)

Sequence

ccgccccgcgccgucugggcUCGCUUGGGCAGAUCGGGACccgccgcccggccgacgggacggaucccgccuugcaccaagugaaucggagccggcgcagcca
..((...(((((((((((..((((((((((((..(((((.(((...((((.....)))).))).)))))..)))).)))))))).)))))..)))))).))..

Structure

cc  ccc      --     gc        -    AU     C   ccg    g 
  gc   gcgccg  ucugg  UCGCUUGG GCAG  CGGGA ccg   cccg c
  ||   ||||||  |||||  |||||||| ||||  ||||| |||   |||| c
  cg   cgcggc  aggcu  agugaacc cguu  gcccu ggc   gggc g
ac  --a      cg     -a        a    cc     a   --a    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature sof-miR168b

• Accession: MIMAT0001666
• Description: Saccharum officinarum sof-miR168b mature miRNA
• Sequence: 21 - UCGCUUGGGCAGAUCGGGAC - 40
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13