Accession
MI0001765
Description
Saccharum officinarum
sof-MIR408a precursor miRNA
Gene family
MIPF0000102;
MIR408
Literature search
9 open access papers mention sof-MIR408a
(91 sentences)
(91 sentences)
Sequence
agaagauggguaugguuggagacagggaugaggcagagcaugggaugaggccaucaacaaaauuuccaauuucuguccuccgcuaggccgcuacugcauuucuguuugcuugcucacaaaacggagggauuugugagaguuaucaggcagaaagaacaaagaaggugccucccuggugaaguggugauggccugaccugagacggcugagagcucagcugguguccuguuguugcuuccucccCUGCACUGCCUCUUCCCUGGCuccccaccguugcccuugc
.......(((((((((.((((.((((((.(((((((.(((.((((.(((((...(((((..................(((...(((((((.((((((.((((((((((....((((((((.(.....).))))))))......)))))))))).............(((.....)))...)))))).)))))))....))).(((((((....)))))))......)))))..))))).)))).))).))))))).)))))).))))..)))).)))))....
.......(((((((((.((((.((((((.(((((((.(((.((((.(((((...(((((..................(((...(((((((.((((((.((((((((((....((((((((.(.....).))))))))......)))))))))).............(((.....)))...)))))).)))))))....))).(((((((....)))))))......)))))..))))).)))).))).))))))).)))))).))))..)))).)))))....
Structure
agaagau - -u a u a u u cau -------aaauuuccaauuucuguc -cgc c --------------------------a --cuug a g
gggua uggu ggag caggga gaggcag gca ggga gaggc caaca cuc uaggccg uacugc uuucuguuug cucacaaa c g
||||| |||| |||| |||||| ||||||| ||| |||| ||||| ||||| ||| ||||||| |||||| |||||||||| |||||||| | a
cccgu gcca ccuC GUCCCU CUCCGUC CGU cccu cuucg guugu gag guccggu guggug aaagacggac gaguguuu g g
---cguu u cc G U A C c -uu ccuguggucgacucgagagucggca ucca a aaguggucccuccguggaagaaacaag uauuga a g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Unknown
Database links
Mature sof-miR408a
| Accession | MIMAT0001667 |
| Description | Saccharum officinarum sof-miR408a mature miRNA |
| Sequence | 244 - CUGCACUGCCUCUUCCCUGGC - 264 |
| Evidence | not_experimental |
References
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