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miRBase |
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Stem-loop sequence zma-MIR394b |
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Accession | MI0001795 (change log) | ||||
Description | Zea mays miR394b stem-loop | ||||
Gene family | MIPF0000100; MIR394 | ||||
Literature search |
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8 open access papers mention zma-MIR394b | ||||
Stem-loop |
-u c u ag - u c cuucuu -ucuu 5' gg gcuuac g aguucc uuggca u uguccaccucc gacga gcagaa || |||||| | |||||| |||||| | ||||||||||| ||||| ||||| a 3' uc cggaug c ucgagg aaccgu a acggguggagg uuguu cguuug cc - - -g u c u -uuugu uuuuu |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence zma-miR394b-5p |
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Accession | MIMAT0001697 |
Previous IDs | zma-miR394b |
Sequence |
21 - uuggcauucuguccaccucc - 40 |
Deep sequencing | 1225 reads, 149 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Mature sequence zma-miR394b-3p |
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Accession | MIMAT0015163 |
Previous IDs | zma-miR394b* |
Sequence |
86 - aggugggcauacugccaaug - 105 |
Deep sequencing | 519 reads, 142 experiments |
Evidence | experimental; Illumina [2] |
References |
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1 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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