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miRBase |
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Stem-loop sequence zma-MIR169f |
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Accession | MI0001827 (change log) | ||||
Description | Zea mays miR169f stem-loop | ||||
Gene family | MIPF0000012; MIR169_1 | ||||
Literature search |
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31 open access papers mention zma-MIR169f | ||||
Stem-loop |
-- c a uuc u u g - augggcuauggcuacaugccug 5' ac agagcug uucg aguagccaagga gac ugccua g uauauaugc a || ||||||| |||| |||||||||||| ||| |||||| | ||||||||| 3' ug ucucggc aggc ucaucgguuccu cug acggau u auauguacg g ac a g --- u u g g agucgcaguguucucugaccga |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence zma-miR169f-5p |
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Accession | MIMAT0001729 |
Previous IDs | zma-miR169f |
Sequence |
21 - uagccaaggaugacuugccua - 41 |
Deep sequencing | 1452 reads, 126 experiments |
Evidence | experimental; Illumina [2] |
Mature sequence zma-miR169f-3p |
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Accession | MIMAT0015194 |
Previous IDs | zma-miR169f* |
Sequence |
113 - ggcaugucuuccuuggcuacu - 133 |
Deep sequencing | 1 reads, 1 experiments |
Evidence | experimental; Illumina [2] |
References |
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1 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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