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miRBase |
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Stem-loop sequence zma-MIR169i |
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Accession | MI0001830 (change log) | ||||
Description | Zea mays miR169i stem-loop | ||||
Gene family | MIPF0000012; MIR169_1 | ||||
Literature search |
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31 open access papers mention zma-MIR169i | ||||
Stem-loop |
- a gu c -u - u u u cu - cu c u -aa gac - gu c - ag g 5' g ugagagug ag uc ggu agccaagga gacu gccugug g ggcca cg c ccuca gc g cauc uc gucga cga cg c a | |||||||| || || ||| ||||||||| |||| ||||||| | ||||| || | ||||| || | |||| || ||||| ||| || | 3' c auucucac uc ag ccg ucgguuccu cuga cgggcac c cuggu gc g ggggu cg c guag ag uagcu gcu gc g g g c -- - uc a - - u -u u au u u aag --a g ag a a ga c |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence zma-miR169i-5p |
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Accession | MIMAT0001732 |
Previous IDs | zma-miR169i |
Sequence |
21 - uagccaaggaugacuugccug - 41 |
Deep sequencing | 2686 reads, 178 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Mature sequence zma-miR169i-3p |
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Accession | MIMAT0015195 |
Previous IDs | zma-miR169i* |
Sequence |
155 - ggcagucuccuuggcuag - 172 |
Deep sequencing | 2033 reads, 194 experiments |
Evidence | experimental; Illumina [2] |
References |
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1 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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