Stem-loop sequence dre-mir-26a-1

AccessionMI0001923
DescriptionDanio rerio miR-26a-1 stem-loop
Gene family MIPF0000043; mir-26
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled mir-26_microRNA_precursor_family. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

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Stem-loop
   uuugg     uu     a    a          -g  a 
5'      ccugg  caagu aucc ggauaggcuu  ug u
        |||||  ||||| |||| ||||||||||  || g
3'      ggacu  guuca uagg cuuauccgaa  gc u
   aguaa     ug     g    g          ag  c 
Get sequence
Deep sequencing
2243 reads, 222 reads per million, 4 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Zv9) Overlapping transcripts
9: 42806576-42806653 [+]
sense
OTTDART00000027578 ; ctdsp1-001; intron 4
ENSDART00000100226 ; ctdsp1-001; intron 4
Database links

Mature sequence dre-miR-26a-5p

Accession MIMAT0001794
Previous IDsdre-miR-26a
Sequence

11 - 

uucaaguaauccaggauaggcu

 - 32

Get sequence
Deep sequencing23132 reads, 4 experiments
Evidence experimental; cloned [1]

Mature sequence dre-miR-26a-3p

Accession MIMAT0031947
Sequence

49 - 

ccuauucgggaugacuugguuc

 - 70

Get sequence
Deep sequencing269 reads, 4 experiments
Evidence not experimental

References

1
PMID:15937218 "The developmental miRNA profiles of zebrafish as determined by small RNA cloning" Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T Genes Dev. 19:1288-1293(2005).