Stem-loop sequence dre-mir-26a-2

AccessionMI0001925
Previous IDsdre-mir-26a-3
DescriptionDanio rerio miR-26a-2 stem-loop
Gene family MIPF0000043; mir-26
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled mir-26_microRNA_precursor_family. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

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Stem-loop
   guguggacu     g   -    -----       uc   u  u         ca         gu ug 
5'          ugagu cug gaag     ugguugu  ccu gu caaguaauc  ggauaggcu  c  u
            ||||| ||| ||||     |||||||  ||| || |||||||||  |||||||||  |   
3'          acuca ggu cuuc     gccgacg  gga ca guucauuag  cuuauccgg  g  c
   ------cgu     a   a    ccguu       gu   u  c         ua         ag uc 
Get sequence
Deep sequencing
916 reads, 87.7 reads per million, 4 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Zv9) Overlapping transcripts
2: 21171567-21171694 [+]
sense
ENSDART00000089433 ; ctdsplb-201; intron 4
Database links

Mature sequence dre-miR-26a-5p

Accession MIMAT0001794
Previous IDsdre-miR-26a
Sequence

37 - 

uucaaguaauccaggauaggcu

 - 58

Get sequence
Deep sequencing23132 reads, 4 experiments
Evidence experimental; cloned [1]

Mature sequence dre-miR-26a-2-3p

Accession MIMAT0031948
Sequence

73 - 

ccuauucaugauuacuugcacu

 - 94

Get sequence
Deep sequencing47 reads, 2 experiments
Evidence not experimental

References

1
PMID:15937218 "The developmental miRNA profiles of zebrafish as determined by small RNA cloning" Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T Genes Dev. 19:1288-1293(2005).