miRBase entry: dre-mir-26a-2

Stem-loop dre-mir-26a-2


Accession
MI0001925
Description
Danio rerio dre-mir-26a-2 precursor miRNA
Gene family
MIPF0000043; mir-26

Literature search
10 open access papers mention dre-mir-26a-2
(121 sentences)

Sequence

134871 reads, 8299 reads per million, 11 experiments
guguggacuugagugcuggaagugguuguucccuugUUCAAGUAAUCCAGGAUAGGCUgucuguccuggaggCCUAUUCAUGAUUACUUGCACUagguggcagccguugcccuucauggaacucaugc
.........(((((.((.((((((((((((.(((.((.(((((((((..(((((((((.((......)).)))))))))..))))))))).)).))).)))))))).....))))..)).)))))...

Structure
guguggacu     g  -g    -----        c   u  U         CA         g  ug 
         ugagu cu  gaag     ugguuguu ccu gU CAAGUAAUC  GGAUAGGCU uc  u
         ||||| ||  ||||     |||||||| ||| || |||||||||  ||||||||| ||   
         acuca gg  cuuc     gccgacgg gga CA GUUCAUUAG  CUUAUCCgg gg  c
------cgu     a  ua    ccguu        u   U  C         UA         a  uc 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr2: 21375467-21375594 [+]

Database links

Mature dre-miR-26a-5p

Accession MIMAT0001794
Description Danio rerio dre-miR-26a-5p mature miRNA
Sequence 37 - UUCAAGUAAUCCAGGAUAGGCU - 58
Evidence experimental
cloned [1]
Database links
Predicted targets

Mature dre-miR-26a-2-3p

Accession MIMAT0031948
Description Danio rerio dre-miR-26a-2-3p mature miRNA
Sequence 73 - CCUAUUCAUGAUUACUUGCACU - 94
Evidence not_experimental
Database links

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293