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miRBase |
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Stem-loop sequence dre-mir-27c |
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Accession | MI0001930 (change log) | |||||||
Previous IDs | dre-mir-27c | |||||||
Description | Danio rerio miR-27c stem-loop | |||||||
Gene family | MIPF0000036; mir-27 | |||||||
Literature search |
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7 open access papers mention dre-mir-27c | |||||||
Stem-loop |
gugu u c u a cauc 5' gguu ggug caggacuuaacc acu gugaaca ug g |||| |||| |||||||||||| ||| ||||||| || 3' ccag ccgc gucuugaauugg uga cacuugu ac a aucc c - - a uuca |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence dre-miR-27c-5p |
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Accession | MIMAT0003401 |
Previous IDs | dre-miR-27c* |
Sequence |
19 - cuuaacccacuugugaacaaug - 40 |
Deep sequencing | 7184 reads, 9 experiments |
Evidence | experimental; cloned [1] |
Database links |
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Mature sequence dre-miR-27c-3p |
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Accession | MIMAT0001798 |
Previous IDs | dre-miR-27c |
Sequence |
56 - uucacagugguuaaguucugc - 76 |
Deep sequencing | 178212 reads, 11 experiments |
Evidence | experimental; cloned [1] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:15937218
"The developmental miRNA profiles of zebrafish as determined by small RNA cloning"
Genes Dev. 19:1288-1293(2005).
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