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miRBase |
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Stem-loop sequence dre-mir-100-1 |
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Accession | MI0001958 (change log) | |||||
Description | Danio rerio miR-100-1 stem-loop | |||||
Gene family | MIPF0000033; mir-10 | |||||
Literature search |
5 open access papers mention dre-mir-100-1 | |||||
Stem-loop |
agaccu - u c a cg c a g ac 5' gaag gcc ugc gaca a acc uagau cga cuugug ug u |||| ||| ||| |||| | ||| ||||| ||| |||||| || 3' cuuc cgg gug cugu u ugg aucua guu gaacac ac g ------ u u c a au u c - cu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence dre-miR-100-5p |
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Accession | MIMAT0001813 |
Previous IDs | dre-miR-100 |
Sequence |
24 - aacccguagauccgaacuugug - 45 |
Deep sequencing | 163841 reads, 11 experiments |
Evidence | experimental; cloned [1] |
Database links |
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Predicted targets |
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Mature sequence dre-miR-100-3p |
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Accession | MIMAT0031957 |
Sequence |
59 - caagcuuguaucuauagguauc - 80 |
Deep sequencing | 202 reads, 8 experiments |
Evidence | not experimental |
Database links |
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References |
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1 |
PMID:15937218
"The developmental miRNA profiles of zebrafish as determined by small RNA cloning"
Genes Dev. 19:1288-1293(2005).
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