Stem-loop sequence dre-mir-125b-1

AccessionMI0001975 (change log)
DescriptionDanio rerio miR-125b-1 stem-loop
Gene family MIPF0000033; mir-10
Stem-loop
   u    uugc g        -     cu   aau ug      a  -a    u    c           -    uuu 
5'  ucug    a guuggcgg uuggu  gca   g  ccucuc ca  uccc gaga ccuaacuugug acgu   c
    ||||    | |||||||| |||||  |||   |  |||||| ||  |||| |||| ||||||||||| ||||   c
3'  aggc    u cggccgcc gacua  ugu   c  ggggag gu  aggg uucu ggauugggcac ugua   u
   a    ---- g        c     -c   -cu gu      a  cg    -    u           g    uug 
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Confidence
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Genome context
Coordinates (GRCz11; GCA_000002035.4) Overlapping transcripts
chr15: 21447656-21447800 [+]
intergenic
Clustered miRNAs
< 10kb from dre-mir-125b-1
dre-let-7a-2chr15: 21437876-21437959 [+]
dre-mir-125b-1chr15: 21447656-21447800 [+]
Database links

Mature sequence dre-miR-125b-5p

Accession MIMAT0001821
Previous IDsdre-miR-125b
Sequence

46 - 

ucccugagacccuaacuuguga

 - 67

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Evidence experimental; cloned [1]
Database links
Predicted targets

Mature sequence dre-miR-125b-1-3p

Accession MIMAT0031963
Sequence

86 - 

acggguuagguucuugggagcu

 - 107

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Evidence not experimental
Database links

References

1
PMID:15937218 "The developmental miRNA profiles of zebrafish as determined by small RNA cloning" Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T Genes Dev. 19:1288-1293(2005).