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miRBase |
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Stem-loop sequence dre-mir-125b-3 |
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Accession | MI0001977 (change log) | ||||
Description | Danio rerio miR-125b-3 stem-loop | ||||
Gene family | MIPF0000033; mir-10 | ||||
Literature search |
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24 open access papers mention dre-mir-125b-3 | ||||
Stem-loop |
c ---g accg acuccu u u c c gc u 5' cc gugc gcc cugc cc gguccc gaga c uaacuuguga uuug g || |||| ||| |||| || |||||| |||| | |||||||||| |||| u 3' gg cacg cgg gacg gg ccaggg uucu g auuggacacu aaau g u aaaa --ga ------ u - c a aa c |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence dre-miR-125b-5p |
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Accession | MIMAT0001821 |
Previous IDs | dre-miR-125b |
Sequence |
31 - ucccugagacccuaacuuguga - 52 |
Deep sequencing | 62216 reads, 11 experiments |
Evidence | experimental; cloned [1] |
Database links |
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Predicted targets |
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Mature sequence dre-miR-125b-3-3p |
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Accession | MIMAT0031965 |
Sequence |
72 - acagguuaagcucuugggaccu - 93 |
Deep sequencing | 417 reads, 11 experiments |
Evidence | not experimental |
Database links |
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References |
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1 |
PMID:15937218
"The developmental miRNA profiles of zebrafish as determined by small RNA cloning"
Genes Dev. 19:1288-1293(2005).
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