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miRBase |
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Stem-loop sequence dre-mir-125c |
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Accession | MI0001978 (change log) | |||||||
Description | Danio rerio miR-125c stem-loop | |||||||
Gene family | MIPF0000033; mir-10 | |||||||
Literature search |
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11 open access papers mention dre-mir-125c | |||||||
Stem-loop |
u uc ug ac a ---- uc 5' gcucucc ccugu cc ag ccu acucguga gg u ||||||| ||||| || || ||| |||||||| || u 3' cgggagg ggaca gg uc gga ugggcacu cc u u ga gu ga c aaaa uu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence dre-miR-125c-5p |
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Accession | MIMAT0001822 |
Previous IDs | dre-miR-125c |
Sequence |
14 - ucccugagacccuaacucguga - 35 |
Deep sequencing | 20256 reads, 11 experiments |
Evidence | experimental; cloned [1] |
Database links |
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Predicted targets |
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Mature sequence dre-miR-125c-3p |
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Accession | MIMAT0031966 |
Sequence |
53 - acgggucaggagcuugggagac - 74 |
Deep sequencing | 164 reads, 10 experiments |
Evidence | not experimental |
Database links |
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References |
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1 |
PMID:15937218
"The developmental miRNA profiles of zebrafish as determined by small RNA cloning"
Genes Dev. 19:1288-1293(2005).
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