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miRBase |
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Stem-loop sequence dre-mir-153c |
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Accession | MI0002022 (change log) | ||||
Description | Danio rerio miR-153c stem-loop | ||||
Gene family | MIPF0000050; mir-153 | ||||
Literature search |
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4 open access papers mention dre-mir-153c | ||||
Stem-loop |
- -a ----- gac -g c - - a uagu 5' gauggag auc guagguc ccug gua cacaccu ccagug ucauuuuugugauu ugcagcu g c ||||||| ||| ||||||| |||| ||| ||||||| |||||| |||||||||||||| ||||||| | 3' cuaccuc uag cauucgg ggac cgu gugugga gguuac aguaaaaacacuga acguuga c u c gc aguga -ga ga u u u c uggg |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence dre-miR-153c-5p |
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Accession | MIMAT0031979 |
Sequence |
43 - gucauuuuugugauuugcagcu - 64 |
Deep sequencing | 4501 reads, 5 experiments |
Evidence | not experimental |
Database links |
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Mature sequence dre-miR-153c-3p |
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Accession | MIMAT0001850 |
Previous IDs | dre-miR-153c |
Sequence |
81 - uugcauagucacaaaaaugauc - 102 |
Deep sequencing | 6813 reads, 11 experiments |
Evidence | experimental; cloned [1] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:15937218
"The developmental miRNA profiles of zebrafish as determined by small RNA cloning"
Genes Dev. 19:1288-1293(2005).
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