miRBase entry: dre-mir-155

Stem-loop dre-mir-155


Accession
MI0002023
Description
Danio rerio dre-mir-155 precursor miRNA
Gene family
MIPF0000157; mir-155

Literature search
9 open access papers mention dre-mir-155
(47 sentences)

Sequence

1212 reads, 89 reads per million, 11 experiments
uggugcagguUUAAUGCUAAUCGUGAUAGGGGuuuagugcugaugaacaccuaugcuguuagcauuaaucuugcgcua
(((((((((.(((((((((((.((.(((((.(((((.......))))).))))))).))))))))))).)))))))))

Structure
         u           C  G     G     gu 
uggugcagg UUAAUGCUAAU GU AUAGG Guuua  g
||||||||| ||||||||||| || ||||| |||||  c
aucgcguuc aauuacgauug cg uaucc caagu  u
         u           u  -     a     ag 


Annotation confidence Not enough data
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Genome context
chr1: 576444-576521 [+]

Database links

Mature dre-miR-155

Accession MIMAT0001851
Description Danio rerio dre-miR-155 mature miRNA
Sequence 11 - UUAAUGCUAAUCGUGAUAGGGG - 32
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293