Accession
MI0002024
Description
Danio rerio
dre-mir-181c precursor miRNA
Gene family
MIPF0000007;
mir-181
Literature search
9 open access papers mention dre-mir-181c
(31 sentences)
(31 sentences)
Sequence
5193
reads,
349
reads per million, 11 experiments
ggguccugauuCACAUUCAUUGCUGUCGGUGGGuuuuaucucuucgaCUCGCCGGACAAUGAAUGAGAAcuacggcuc
(((((.((.(((.(((((((((...((((((((((..........)))))))))).))))))))).))).)).)))))
(((((.((.(((.(((((((((...((((((((((..........)))))))))).))))))))).))).)).)))))
Structure
c a A CUG uuau
ggguc ug uuC CAUUCAUUG UCGGUGGGuu c
||||| || ||| ||||||||| ||||||||||
cucgg au AAG GUAAGUAAC GGCCGCUCag u
c c A --A cuuc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr3: 34197694-34197771 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dre-mir-181c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-181c-5p
| Accession | MIMAT0001852 |
| Description | Danio rerio dre-miR-181c-5p mature miRNA |
| Sequence | 12 - CACAUUCAUUGCUGUCGGUGGG - 33 |
| Evidence |
experimental
cloned [1] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-181c-3p
| Accession | MIMAT0031980 |
| Description | Danio rerio dre-miR-181c-3p mature miRNA |
| Sequence | 48 - CUCGCCGGACAAUGAAUGAGAA - 69 |
| Evidence | not_experimental |
| Database links |
|
References
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