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miRBase |
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Stem-loop sequence dre-mir-200c |
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Accession | MI0002039 (change log) | |||||||
Description | Danio rerio miR-200c stem-loop | |||||||
Gene family | MIPF0000019; mir-8 | |||||||
Literature search |
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18 open access papers mention dre-mir-200c | |||||||
Stem-loop |
- ugg c - a u u uua 5' uggaug cc cu cauc uuac aggcagu uugga g u |||||| || || |||| |||| ||||||| ||||| | 3' aucuac gg ga guag aaug uccguca aaucu u a u -ua c u g u c ucu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence dre-miR-200c-5p |
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Accession | MIMAT0031986 |
Sequence |
15 - caucuuacaaggcaguuuugga - 36 |
Deep sequencing | 404 reads, 10 experiments |
Evidence | not experimental |
Database links |
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Mature sequence dre-miR-200c-3p |
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Accession | MIMAT0001863 |
Previous IDs | dre-miR-200c |
Sequence |
51 - uaauacugccugguaaugaugc - 72 |
Deep sequencing | 39597 reads, 11 experiments |
Evidence | experimental; cloned [1] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:15937218
"The developmental miRNA profiles of zebrafish as determined by small RNA cloning"
Genes Dev. 19:1288-1293(2005).
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