Stem-loop dre-mir-206-2

Accession

MI0002046

Description

Danio rerio dre-mir-206-2 precursor miRNA

Literature search

14 open access papers mention dre-mir-206-2
(206 sentences)

Sequence

450892 reads, 28035 reads per million, 5 experiments

gaguuggcuguugcuuauugagacgacauacuuccuuauauccccauauucagaauuaaucuaUGGAAUGUAAGGAAGUGUGUGGcuucagugagaucucaucaucauc
..(.(((.((...(((((((((.(.((((((((((((((((..(((((.............))))).)))))))))))))))).).)))))))))....))))).)...

Structure

-ga u   c  -uug         a g                cc     uucag 
   g ugg ug    cuuauugag c acauacuuccuuauau  ccaua     a
   | ||| ||    ||||||||| | ||||||||||||||||  |||||     a
   c acu ac    gagugacuu G UGUGUGAAGGAAUGUA  GGUau     u
cua u   -  ucua         c G                -A     cuaau 

Annotation confidence Low

Genome context

chr17: 5967238-5967346 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dre-mir-206-2

Mature dre-miR-206-3p

• Accession: MIMAT0001866
• Description: Danio rerio dre-miR-206-3p mature miRNA
• Sequence: 64 - UGGAAUGUAAGGAAGUGUGUGG - 85
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293