miRBase entry: dre-mir-206-2

Stem-loop dre-mir-206-2


Accession
MI0002046
Description
Danio rerio dre-mir-206-2 precursor miRNA
Gene family
MIPF0000038; mir-1

Literature search
14 open access papers mention dre-mir-206-2
(206 sentences)

Sequence

450892 reads, 28086 reads per million, 5 experiments
gaguuggcuguugcuuauugagacgacauacuuccuuauauccccauauucagaauuaaucuaUGGAAUGUAAGGAAGUGUGUGGcuucagugagaucucaucaucauc
..(.(((.((...(((((((((.(.((((((((((((((((..(((((.............))))).)))))))))))))))).).)))))))))....))))).)...

Structure
-ga u   c  -uug         a g                cc     uucag 
   g ugg ug    cuuauugag c acauacuuccuuauau  ccaua     a
   | ||| ||    ||||||||| | ||||||||||||||||  |||||     a
   c acu ac    gagugacuu G UGUGUGAAGGAAUGUA  GGUau     u
cua u   -  ucua         c G                -A     cuaau 


Annotation confidence Not enough data
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Genome context
chr17: 5967238-5967346 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dre-mir-206-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dre-miR-206-3p

Accession MIMAT0001866
Description Danio rerio dre-miR-206-3p mature miRNA
Sequence 64 - UGGAAUGUAAGGAAGUGUGUGG - 85
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293