Accession
MI0002062
Description
Danio rerio
dre-mir-301c precursor miRNA
Gene family
MIPF0000034;
mir-130
Literature search
1 open access papers mention dre-mir-301c
(1 sentences)
(1 sentences)
Sequence
1837
reads,
173
reads per million, 10 experiments
ugaggucagcuGCUCUGACGAUGUUGCACUACuguaccauccauucuagCAGUGCAAUAGUAUUGUCAUAGcauuuagccucu
.(((((.((.((((.(((((((((((((((.(((............))).))))))))...))))))).)))).)).))))).
.(((((.((.((((.(((((((((((((((.(((............))).))))))))...))))))).)))).)).))))).
Structure
u c c C --- A uacca gaggu ag uGCU UGACGAU GUUGCACU Cug u ||||| || |||| ||||||| |||||||| ||| cuccg uu acGA ACUGUUA UAACGUGA gau c u a u U UGA C cuuac
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr10: 17454490-17454572 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dre-mir-301c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-301c-3p
| Accession | MIMAT0001872 |
| Description | Danio rerio dre-miR-301c-3p mature miRNA |
| Sequence | 50 - CAGUGCAAUAGUAUUGUCAUAG - 71 |
| Evidence |
experimental
cloned [1] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-301c-5p
| Accession | MIMAT0031991 |
| Description | Danio rerio dre-miR-301c-5p mature miRNA |
| Sequence | 12 - GCUCUGACGAUGUUGCACUAC - 32 |
| Evidence | not_experimental |
| Database links |
|
References
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