Stem-loop sequence dre-mir-430i-3

AccessionMI0002141 (change log)
DescriptionDanio rerio miR-430i-3 stem-loop
Gene family MIPF0000003; mir-430
Stem-loop
      u  -auc g   -  uc     -      g   uu      
5' guc cu    g uac cc  acaaa agcacu acu  gaugc 
   ||| ||    | ||| ||  ||||| |||||| |||  |||| u
3' cag ga    u aug gg  uguuu ucguga ugg  uuaug 
      u  acuu g   c  -u     a      a   -u      
Get sequence
Confidence
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Genome context
Coordinates (GRCz11; GCA_000002035.4) Overlapping transcripts
chr4: 28705553-28705634 [+]
intergenic
Clustered miRNAs
< 10kb from dre-mir-430i-3
dre-mir-430a-12chr4: 28695576-28695657 [+]
dre-mir-430c-4chr4: 28695717-28695789 [+]
dre-mir-430b-1chr4: 28695960-28696040 [+]
dre-mir-430a-3chr4: 28696691-28696772 [+]
dre-mir-430c-5chr4: 28696854-28696926 [+]
dre-mir-430b-6chr4: 28697111-28697191 [+]
dre-mir-430a-13chr4: 28697317-28697398 [+]
dre-mir-430c-6chr4: 28697458-28697530 [+]
dre-mir-430b-11chr4: 28697715-28697795 [+]
dre-mir-430a-16chr4: 28697921-28698002 [+]
dre-mir-430b-9chr4: 28698305-28698385 [+]
dre-mir-430a-5chr4: 28699035-28699116 [+]
dre-mir-430c-7chr4: 28699198-28699270 [+]
dre-mir-430b-12chr4: 28699455-28699535 [+]
dre-mir-430i-1chr4: 28699661-28699742 [+]
dre-mir-430c-8chr4: 28699824-28699896 [+]
dre-mir-430b-2chr4: 28700067-28700147 [+]
dre-mir-430a-6chr4: 28700798-28700879 [+]
dre-mir-430c-9chr4: 28700961-28701033 [+]
dre-mir-430b-7chr4: 28701218-28701298 [+]
dre-mir-430a-11chr4: 28701424-28701505 [+]
dre-mir-430c-10chr4: 28701587-28701659 [+]
dre-mir-430b-13chr4: 28701844-28701924 [+]
dre-mir-430i-2chr4: 28702050-28702131 [+]
dre-mir-430c-11chr4: 28702213-28702285 [+]
dre-mir-430b-18chr4: 28702456-28702536 [+]
dre-mir-430a-7chr4: 28703187-28703268 [+]
dre-mir-430c-12chr4: 28703350-28703422 [+]
dre-mir-430b-14chr4: 28703607-28703687 [+]
dre-mir-430a-17chr4: 28703813-28703894 [+]
dre-mir-430b-20chr4: 28704197-28704277 [+]
dre-mir-430a-8chr4: 28704927-28705008 [+]
dre-mir-430c-13chr4: 28705090-28705162 [+]
dre-mir-430b-15chr4: 28705347-28705427 [+]
dre-mir-430i-3chr4: 28705553-28705634 [+]
dre-mir-430c-14chr4: 28705716-28705788 [+]
dre-mir-430b-19chr4: 28705959-28706039 [+]
dre-mir-430a-9chr4: 28706690-28706771 [+]
dre-mir-430c-15chr4: 28706853-28706925 [+]
dre-mir-430b-16chr4: 28707110-28707190 [+]
dre-mir-430a-14chr4: 28707316-28707397 [+]
dre-mir-430c-16chr4: 28707457-28707529 [+]
dre-mir-430b-3chr4: 28707700-28707780 [+]
dre-mir-430a-10chr4: 28708430-28708511 [+]
dre-mir-430c-17chr4: 28708593-28708665 [+]
dre-mir-430b-8chr4: 28708850-28708930 [+]
dre-mir-430a-15chr4: 28709056-28709137 [+]
dre-mir-430c-18chr4: 28709197-28709269 [+]
dre-mir-430b-17chr4: 28709454-28709534 [+]
Database links

Mature sequence dre-miR-430i-5p

Accession MIMAT0032003
Sequence

13 - 

acccucacaaaagcacugacu

 - 33

Get sequence
Evidence not experimental

Mature sequence dre-miR-430i-3p

Accession MIMAT0001880
Previous IDsdre-miR-430i
Sequence

50 - 

uaagugcuauuuguuggcguag

 - 71

Get sequence
Evidence experimental; cloned [1]
Database links
Predicted targets

References

1
PMID:15937218 "The developmental miRNA profiles of zebrafish as determined by small RNA cloning" Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T Genes Dev. 19:1288-1293(2005).