Stem-loop dre-mir-460

Accession

MI0002181

Description

Danio rerio dre-mir-460 precursor miRNA

Gene family

MIPF0000134; mir-460

Sequence

1755 reads, 146 reads per million, 11 experiments

cuccucggcuCCUGCAUUGUACACACUGUGCGgaaaacauggacaugCACAGCGCAUACAAUGUGGAUGcuguggag
((((.(((((((.((((((((..(.(((((((.............))))))).)..))))))))))).)))).))))

Structure

    u    -   U        CA A       gaaaa 
cucc cggc uCC GCAUUGUA  C CUGUGCG     c
|||| |||| ||| ||||||||  | |||||||     a
gagg gucG AGG UGUAACAU  G GACACgu     u
    u    U   -        AC C       acagg 

Annotation confidence High

Genome context

chr2: 2301358-2301434 [-]

Mature dre-miR-460-5p

• Accession: MIMAT0001887
• Description: Danio rerio dre-miR-460-5p mature miRNA
• Sequence: 11 - CCUGCAUUGUACACACUGUGCG - 32
• Evidence: experimental ; cloned [1]

Mature dre-miR-460-3p

• Accession: MIMAT0001888
• Description: Danio rerio dre-miR-460-3p mature miRNA
• Sequence: 48 - CACAGCGCAUACAAUGUGGAUG - 69
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293