Accession
MI0002231
Description
Populus trichocarpa
ptc-MIR166n precursor miRNA
Gene family
MIPF0000004;
MIR166
Literature search
6 open access papers mention ptc-MIR166n
(23 sentences)
(23 sentences)
Sequence
aagggguguuuggaaugaaguuugauccaagauccuugucucucccguuaacuuagucucuguuaccguuagguauucauuacugaguguauuugcagcccccuugucugauuuuagcaucaugagaguaggaagugcuggugaucauaggguuugguucaagauccauuugacucuucucuuuauaucucuccuguguccuagcugguaaucuguaguagucuuaauuaucccuuacuucuuguuaauuuuuagguuugaucuugcaaguaauuauauuuggaaaauaucauaaaaugaucUCGGACCAGGCUUCAUUCCUUacaccuug
..(((((((..(((((((((((((.(((.(((((((((.(((((......(((((((......((((....))))......)))))))......((((.....)))).((((......)))).)))))))))....(((((.((.(((((((...(((..((((...............))))...)))..)))))))))))))).(((((...(((((.......)))))...))))).((((........))))..((((.((.((((((....)))))).))...))))......))))).))).)))))))))))))..))))))).
..(((((((..(((((((((((((.(((.(((((((((.(((((......(((((((......((((....))))......)))))))......((((.....)))).((((......)))).)))))))))....(((((.((.(((((((...(((..((((...............))))...)))..)))))))))))))).(((((...(((((.......)))))...))))).((((........))))..((((.((.((((((....)))))).))...))))......))))).))).)))))))))))))..))))))).
Structure
aa uu a a cuugucucucccguuaacuuagucucuguuaccguuagguauucauuacugaguguauuugcagcccccuugucugauuuuagcaucaugagaguaggaagu u u uuu -uc uccauu ggggugu ggaaugaaguuug ucc agauc gcugg ga cauaggg ggu aaga u ||||||| ||||||||||||| ||| ||||| ||||| || ||||||| ||| |||| g uuccaca CCUUACUUCGGAC AGG Ucuag cgauc cu guguccu cua uucu a -g UU C C ---------uaaaauacuauaaaagguuuauauuaaugaacguucuaguuuggauuuuuaauuguucuucauucccuauuaauucugaugaugucuaauggu - - -cu uau cuucuc
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000355.2: 5666163-5666493 [-]
Database links
Mature ptc-miR166n
| Accession | MIMAT0001937 |
| Description | Populus trichocarpa ptc-miR166n mature miRNA |
| Sequence | 303 - UCGGACCAGGCUUCAUUCCUU - 323 |
| Evidence | not_experimental |
References
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