Accession
MI0002256
Description
Populus trichocarpa
ptc-MIR169f precursor miRNA
Gene family
MIPF0000037;
MIR169_2
Literature search
9 open access papers mention ptc-MIR169f
(14 sentences)
(14 sentences)
Sequence
uuauguggugCAGCCAAGGAUGACUUGCCGGaauaagcuaugaucaauagcuauagcuaugguauuuuucauccuagguuuggcuauauauauauauauauauagccaguuaauugcuauaaaucucagcacauuuauguuuuauaugucugcacacagacacacacaucauugaauguugauguuccaccuccuaugaucaguagucaaucggcaagucaucucuggcuacucaacuc
....((.(.(.(((((.((((((((((((((.....(((((((((((((((....)))))((..........)).(((((((((((((((((....))))))))))))).....((((.........))))...............((((((....))))))...((((((........))))))...))))....)))))).))))...)))))))))))))).))))).).).))..
....((.(.(.(((((.((((((((((((((.....(((((((((((((((....)))))((..........)).(((((((((((((((((....))))))))))))).....((((.........))))...............((((((....))))))...((((((........))))))...))))....)))))).))))...)))))))))))))).))))).).).))..
Structure
uuau g u C A aauaa - auagcuauagcuaugguauuuuucauccu ------------------------------------------------------------------------------- u
gu g g AGCCA GGAUGACUUGCCGG gcua ugauca aggu uuggcuauauaua a
|| | | ||||| |||||||||||||| |||| |||||| |||| |||||||||||||
ca c c ucggu ucuacugaacggcu ugau acuagu ucca gaccgauauauau u
--cu a u a c --aac g -------------------------aucc ccuuguaguuguaaguuacuacacacacagacacacgucuguauauuuuguauuuacacgacucuaaauaucguuaauu a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000353.2: 12354617-12354855 [+]
Database links
Mature ptc-miR169f
| Accession | MIMAT0001962 |
| Description | Populus trichocarpa ptc-miR169f mature miRNA |
| Sequence | 11 - CAGCCAAGGAUGACUUGCCGG - 31 |
| Evidence | not_experimental |
References
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