Accession
MI0002261
Description
Populus trichocarpa
ptc-MIR169k precursor miRNA
Gene family
MIPF0000012;
MIR169_1
Literature search
9 open access papers mention ptc-MIR169k
(12 sentences)
(12 sentences)
Sequence
ucuuguuuggUAGCCAAGGAUGACUUGCCUGuagccucccucggauucaugaacacgagcauuuauguggugcucaaaagaaaaggagagaaugaucccagcuggcagcgacaaggucaauccauugaaguagcgagaagcaggugauuuauagcuagaauccacaagagguucccagcaaguguccuuggcuaacgagacgg
...(((((.((((((((((((.((((((..(.((((((....(((((((((((((((((((((.....))))))).........((.((......))))..((.((.((..(((((.....)).)))..)).)).))......))).))))).....))))))....)))))).)..)))))))))))))))).)).))))).
...(((((.((((((((((((.((((((..(.((((((....(((((((((((((((((((((.....))))))).........((.((......))))..((.((.((..(((((.....)).)))..)).)).))......))).))))).....))))))....)))))).)..)))))))))))))))).)).))))).
Structure
ucu g - G CU u ccuc ----- - gagcauuuauguggugcucaaaagaaaaggagagaaugaucccag g a ga - u uguuu gU AGCCAAGGAU ACUUGC G agccuc ggauuc augaa cac cu gc gc caa gg c ||||| || |||||||||| |||||| | |||||| |||||| ||||| ||| || || || ||| || a gcaga ca ucgguuccug ugaacg c uuggag ccuaag uauuu gug ga cg ug guu cc a --g g a - ac c aaca aucga a ---------------------------------------gacgaa g a aa a u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000339.2: 16015779-16015981 [-]
Database links
Mature ptc-miR169k
| Accession | MIMAT0001967 |
| Description | Populus trichocarpa ptc-miR169k mature miRNA |
| Sequence | 11 - UAGCCAAGGAUGACUUGCCUG - 31 |
| Evidence | not_experimental |
References
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