Accession
MI0002292
Description
Populus trichocarpa
ptc-MIR172f precursor miRNA
Gene family
MIPF0000035;
MIR172
Literature search
8 open access papers mention ptc-MIR172f
(33 sentences)
(33 sentences)
Sequence
uuguuugcgggugcugcaucaccaagauucacaugcaaaugcauggccgaugauauauguuagaaauuuuuuuuauauaaaaaagauaucuuucuuucuuucugaucaucugccaaaguucuuuggaagugAGAAUCUUGAUGAUGCUGCAUcggcaauaa
....((((.(((((.((((((.((((((((((.(.((((.((.((((.((((((....(..(((((((((((((....)))))))))....))))..)......)))))).))))..))..)))).).))))..)))))).)))))).))))).))))...
....((((.(((((.((((((.((((((((((.(.((((.((.((((.((((((....(..(((((((((((((....)))))))))....))))..)......)))))).))))..))..)))).).))))..)))))).)))))).))))).))))...
Structure
uugu g u c -- a g -u -a c --auau uu ---- a
uugc ggugc gcauca caagau ucac u caaa gc uggc gaugau g agaa auuuuuuuu u
|||| ||||| |||||| |||||| |||| | |||| || |||| |||||| | |||| |||||||||
aacg cUACG CGUAGU GUUCUA Agug a guuu ug accg cuacua c ucuu uagaaaaaa a
-aau g U A AG a g cu aa u gucuuu uu ucua u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000340.2: 21285184-21285344 [+]
Database links
Mature ptc-miR172f
| Accession | MIMAT0001998 |
| Description | Populus trichocarpa ptc-miR172f mature miRNA |
| Sequence | 132 - AGAAUCUUGAUGAUGCUGCAU - 152 |
| Evidence | not_experimental |
References
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