miRBase entry: ptc-MIR474c

Stem-loop ptc-MIR474c


Accession
MI0002360
Description
Populus trichocarpa ptc-MIR474c precursor miRNA

Literature search
1 open access papers mention ptc-MIR474c
(1 sentences)

Sequence

gacaguaaagcuacauccaauaguccuggauucuggucaauaagugCAAAAGCUGUUGGGUUUGGCUGGGcagcu
....((..(((((.((((((((((..((.(((..........))).))...)))))))))).)))))..))....

Structure
gaca  aa     c          -cc  g   cugg 
    gu  agcua auccaauagu   ug auu    u
    ||  ||||| ||||||||||   || |||     
    cG  UCGGU UGGGUUGUCG   AC uga    c
ucga  GG     U          AAA  g   auaa 


Annotation confidence Not enough data
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Genome context
CM000349.2: 13134940-13135014 [+]

Database links

Mature ptc-miR474c

Accession MIMAT0002066
Description Populus trichocarpa ptc-miR474c mature miRNA
Sequence 47 - CAAAAGCUGUUGGGUUUGGCUGGG - 70
Evidence not_experimental

References

  1. PubMed ID: 15994906
    Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis
    "Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL"
    "Plant Cell (2005) 17:2186-2203