miRBase entry: ptr-mir-184

Stem-loop ptr-mir-184


Accession
MI0002602
Description
Pan troglodytes ptr-mir-184 precursor miRNA
Gene family
MIPF0000059; mir-184

Literature search
1 open access papers mention ptr-mir-184
(14 sentences)

Sequence

ccagucacguccccuuaucacuuuuccagcccagcuuugugacuguaaguguUGGACGGAGAACUGAUAAGGGUaggugauuga
.(((((((.(.(((((((((.((((((.(.(((((((((......)))).))))).))))))).))))))))).).))))))).

Structure
c       g c         c      a c     -    ug 
 cagucac u cccuuauca uuuucc g ccagc uuug  a
 ||||||| | ||||||||| |||||| | ||||| ||||   
 guuagug a GGGAAUAGU AAGAGG C GGUug gaau  c
a       g U         C      - A     u    gu 


Annotation confidence Not enough data
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr15: 60305431-60305514 [+]

Database links

Mature ptr-miR-184

Accession MIMAT0002301
Description Pan troglodytes ptr-miR-184 mature miRNA
Sequence 53 - UGGACGGAGAACUGAUAAGGGU - 74
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24