miRBase entry: ptr-mir-186

Stem-loop ptr-mir-186


Accession
MI0002605
Description
Pan troglodytes ptr-mir-186 precursor miRNA
Gene family
MIPF0000109; mir-186


Sequence

ugcuuguaacuuucCAAAGAAUUCUCCUUUUGGGCUUucugguuuuauuuuaagcccaaaggugaauuuuuugggaaguuugagcu
.(((((.(((((((((((((((((.(((((.((((((..............))))))))))).)))))))))))))))))))))).

Structure
u     u                 U     U      ucuggu 
 gcuug aacuuucCAAAGAAUUC CCUUU GGGCUU      u
 ||||| ||||||||||||||||| ||||| ||||||       
 cgagu uugaaggguuuuuuaag ggaaa cccgaa      u
u     -                 u     -      uuuuau 


Annotation confidence Not enough data
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr1: 71113835-71113920 [-]

Database links

Mature ptr-miR-186

Accession MIMAT0002304
Description Pan troglodytes ptr-miR-186 mature miRNA
Sequence 15 - CAAAGAAUUCUCCUUUUGGGCUU - 37
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24