miRBase entry: mml-mir-24-1

Stem-loop mml-mir-24-1


Accession
MI0002637
Description
Macaca mulatta mml-mir-24-1 precursor miRNA
Gene family
MIPF0000041; mir-24

Literature search
2 open access papers mention mml-mir-24-1
(3 sentences)

Sequence

498157 reads, 3588 reads per million, 9 experiments
cuccgGUGCCUACUGAGCUGAUAUCAGUucucauuuuacacacUGGCUCAGUUCAGCAGGAACAGgag
((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).))))

Structure
    g  G   A         UA     ucuca 
cucc GU CCU CUGAGCUGA  UCAGU     u
|||| || ||| |||||||||  |||||     u
gagG CA GGA GACUUGACU  GGUca     u
    A  A   C         -C     cacau 


Annotation confidence High
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr15: 108904876-108904943 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mml-mir-24-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-24-5p

Accession MIMAT0002336
Description Macaca mulatta mml-miR-24-5p mature miRNA
Sequence 6 - GUGCCUACUGAGCUGAUAUCAGU - 28
Evidence not_experimental

Mature mml-miR-24-3p

Accession MIMAT0002337
Description Macaca mulatta mml-miR-24-3p mature miRNA
Sequence 44 - UGGCUCAGUUCAGCAGGAACAG - 65
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24