miRBase entry: ptr-mir-95

Stem-loop ptr-mir-95


Accession
MI0002690
Description
Pan troglodytes ptr-mir-95 precursor miRNA
Gene family
MIPF0000098; mir-95


Sequence

aacacagugggcacucaauaaaugucuguugaauugaaaugcguuacaUUCAACGGGUAUUUAUUGAGCAcccacucugug
.(((.((((((..((((((((((((((((((((((((......))).)))))))))))))))))))))..)))))).))).

Structure
a   c      ca                     -   aa 
 aca aguggg  cucaauaaaugucuguugaau uga  u
 ||| ||||||  ||||||||||||||||||||| |||   
 ugu ucaccc  GAGUUAUUUAUGGGCAACUUa auu  g
g   c      AC                     c   gc 


Annotation confidence Not enough data
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr4: 8500831-8500911 [-]

Database links

Mature ptr-miR-95

Accession MIMAT0002398
Description Pan troglodytes ptr-miR-95 mature miRNA
Sequence 49 - UUCAACGGGUAUUUAUUGAGCA - 70
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24