miRBase entry: ggo-mir-101

Stem-loop ggo-mir-101


Accession
MI0002717
Description
Gorilla gorilla ggo-mir-101 precursor miRNA
Gene family
MIPF0000046; mir-101


Sequence

ugcccuggcucaguuaucacagugcugaugcuguccauucuaaaggUACAGUACUGUGAUAACUGAAGgauggca
((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....))))

Structure
    cuggc                  a    gucca 
ugcc     ucaguuaucacagugcug ugcu     u
||||     |||||||||||||||||| ||||      
acgg     AGUCAAUAGUGUCAUGAC AUgg     u
    uagGA                  -    aaauc 


Annotation confidence Not enough data
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr1: 65882421-65882495 [-]

Database links

Mature ggo-miR-101

Accession MIMAT0002425
Description Gorilla gorilla ggo-miR-101 mature miRNA
Sequence 47 - UACAGUACUGUGAUAACUGAAG - 68
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24