Stem-loop ppa-mir-101

Accession

MI0002720

Description

Pan paniscus ppa-mir-101 precursor miRNA

Gene family

MIPF0000046; mir-101

Sequence

ugcccuggcucaguuaucacagugcugaugcuguccauucuaaaggUACAGUACUGUGAUAACUGAAGgauggca
((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....))))

Structure

    cuggc                  a    gucca 
ugcc     ucaguuaucacagugcug ugcu     u
||||     |||||||||||||||||| ||||      
acgg     AGUCAAUAGUGUCAUGAC AUgg     u
    uagGA                  -    aaauc 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr1: 66194650-66194724 [-]

Mature ppa-miR-101

• Accession: MIMAT0002428
• Description: Pan paniscus ppa-miR-101 mature miRNA
• Sequence: 47 - UACAGUACUGUGAUAACUGAAG - 68
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24