Stem-loop ppa-mir-139

Accession

MI0002769

Description

Pan paniscus ppa-mir-139 precursor miRNA

Gene family

MIPF0000117; mir-139

Sequence

guguauUCUACAGUGCACGUGUCUccaguguggcucggaggcuggagacgcggcccuguuggaguaac
...((((((((((.((.((((((((((((.(.......).)))))))))))))).))).)))))))..

Structure

gug       -   U  A            g gg 
   uauUCUA CAG GC CGUGUCUccagu u  c
   ||||||| ||| || |||||||||||| |  u
   augaggu guc cg gcgcagaggucg a  c
-ca       u   c  -            g gg 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr11: 70916112-70916179 [-]

Mature ppa-miR-139

• Accession: MIMAT0002473
• Description: Pan paniscus ppa-miR-139 mature miRNA
• Sequence: 7 - UCUACAGUGCACGUGUCU - 24
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24