Stem-loop sla-mir-147

Accession

MI0002772

Description

Saguinus labiatus sla-mir-147 precursor miRNA

Gene family

MIPF0000105; mir-147

Sequence

aaucuaaagaaaacauuucugcacacacaccagacuauugaagccaGUGUGUGGAAAUGCUUCUGCcacauu
.......((((..(((((((((((((....................))))))))))))).))))........

Structure

-aaucuaa    aa             acaccagac 
        agaa  cauuucugcacac         u
        ||||  |||||||||||||          
        UCUU  GUAAAGGUGUGUG         a
uuacacCG    -C             accgaaguu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature sla-miR-147

• Accession: MIMAT0002476
• Description: Saguinus labiatus sla-miR-147 mature miRNA
• Sequence: 47 - GUGUGUGGAAAUGCUUCUGC - 66
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24